Microbial Resistance, a Worldwide Concern a Global Sight

A special issue of Pathogens (ISSN 2076-0817).

Deadline for manuscript submissions: 30 November 2024 | Viewed by 4237

Special Issue Editors


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Guest Editor
Laboratorio de Microbiología Clínica, División de Infectología, Instituto Nacional de Rehabilitación Luis Guillermo Ibarra Ibarra, Mexico City 14389, CP, Mexico
Interests: resistance mechanisms; quorum quenching; quorum sensing; microbial physiology; drug-resistant bacteria and fungi; resistance mechanisms; new antimicrobial drugs discovery; epidemiological distribution; carbapenemases; development of new tests to detect resistance mechanisms

E-Mail Website
Guest Editor
Laboratorio de Microbiología Clínica, División de Infectología, Instituto Nacional de Rehabilitación Luis Guillermo Ibarra Ibarra, Mexico City 14389, CP, Mexico
Interests: molecular tests; microbial physiology; resistance mechanisms; Candida spp.

E-Mail Website
Guest Editor
Subdirección de Investigación Biomédica, Instituto Nacional de Rehabilitación Luis Guillermo Ibarra Ibarra, Mexico City 14389, CP, Mexico
Interests: osteomyelit; prosthetic joint infecció; burn infections; microorgansms difficult to threats; multidrug-resistance bacteria

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Guest Editor
Programa “Investigadoras e Investigadores por México” Consejo Nacional de Humanidades, Ciencias y Tecnologías (CONAHCYT), Mexico City 03940, CP, Mexico
Interests: genomics of drug-resistant bacteria and fungi; resistance mechanisms; new antimicrobial drugs discovery; description of new drug-resistant bacterial species; antibiotic-modifying enzymes; evolution of antibiotic resistance

Special Issue Information

Dear Colleagues,

Microbial resistance is a global public health problem. Intervention for the detection, characterization and search for strategies to face microorganisms with resistance mechanisms encourages researchers around the world to focus their efforts in the generation of knowledge. It is estimated that by 2050, there will be 10 million deaths associated with this health problem, while recent studies report that until 2019, there were close to 5 million. This topic aims to bring together experts from around the world to submit their scientific contributions within the framework of identification methods, characterization of resistance mechanisms, clinical-microbiological impact, design of strategies and development of new molecules.

Since the appearance of the first antimicrobial molecules, the battle against microorganisms has intensified. As new molecules were developed, new resistance mechanisms were characterized. In the 1950s–1960s, there was an antimicrobial boom: the golden era. As the years have passed, antimicrobial resistance has been increasing at an accelerated pace; on the other hand, the generation of new antimicrobial molecules, either de novo, by derivatization or chemical synthesis has decreased or slowed down. Due to the decrease of antimicrobials and the increase of resistant pathogens, in 2017, the World Health Organization published a list of priority pathogens for the scientific community to conglomerate efforts for the search of strategies that can combat these types of microorganisms. The pathogens of clinical–microbiological relevance were classified into three groups: critical, high and medium priority. In the critical priority group, microorganisms are widely distributed in nosocomial environments as products of several factors, such as inadequate use, excessive selection pressure and poor selection of molecules. These microorganisms include carbapenem-resistant Acinetobacter baumannii, carbapenem-resistant Pseudomonas aeruginosa and extended-spectrum beta-lactamase-producing and carbapenemase-producing Enterobacterales. The high priority group encompasses vancomycin-resistant Enterococcus faecium, methicillin-resistant and intermediate or resistant to vancomycin Staphylococcus aureus, clarithromycin-resistant Helicobacter pylori, fluoroquinolones-resistant Campylobacter spp., fluoroquinolones-resistant Salmonellae and cephalosporin- and fluoroquinolones-resistant Neisseria gonorrhoeae. On the other hand, in medium priority group, we found Streptococcus pneumoniae not susceptible to penicillin, ampicillin-resistant Haemophilus influenzae and fluroquinolone-resistant Shigella spp. Estimates have been made on the impact of these microorganisms with resistance mechanisms and the outlook for 2050 is quite worrying. According to several studies, we know that today mortality is increased in these microorganisms if they possess resistance mechanisms. The classic comparative case is Enterobacteriaceae resistant to carbapenemase-producing and non-producing carbapenemases, for which the result shows statistical significance in mortality associated with the production of carbapenemase enzymes as the resistance mechanism. The same was observed when Enterococcus faecium has resistance to vancomycin, and increased mortality is associated.

We invite you to submit a review article or original research related to these issues.

The topic selected may be, but are not are limited to, the following:

  • Novel epidemiological reports of the listed microorganisms;
  • Molecular epidemiological reports;
  • New resistance mechanisms;
  • Characterization of resistance mechanisms in clinical isolates;
  • Reports of molecules with activity against these microorganisms;
  • Generation of novel identification methods of resistance mechanisms;
  • Sequencing of complete genomes of microorganisms with resistance mechanisms;
  • Description of new, novel or existing resistance mechanisms in collections of clinical isolates;
  • Behavior of multidrug-resistant microorganisms in geographic regions connoted by molecular epidemiological impact ST.

Prof. Dr. Luis Esaú López Jácome
Prof. Dr. Claudia Adriana Colín-Castro
Prof. Dr. Rafael Franco-Cendejas
Dr. Jossue Mizael Ortiz-Álvarez
Guest Editors

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Keywords

  • gram negative
  • resistance
  • gram positive
  • resistance mechanisms
  • carbapenemases
  • vancomycin
  • efflux pumps
  • loss porins
  • mutations

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Published Papers (2 papers)

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Research

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11 pages, 2798 KiB  
Article
Exploring Antibacterial Usage and Pathogen Surveillance over Five Years in a Tertiary Referral Teaching Hospital Adult General Intensive Care Unit (ICU)
by David Young, Cathrine A. McKenzie, Sanjay Gupta, David Sparkes, Ryan Beecham, David Browning, Ahilanandan Dushianthan and Kordo Saeed
Pathogens 2024, 13(11), 961; https://doi.org/10.3390/pathogens13110961 - 5 Nov 2024
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Abstract
Antimicrobial resistance is a globally recognised health emergency. Intensive care is an area with significant antimicrobial consumption, particularly increased utilisation of broad-spectrum antibacterials, making stewardship programmes essential. We aimed to explore antibacterial consumption, partnered with pathogen surveillance, over a five-year period (2018 to [...] Read more.
Antimicrobial resistance is a globally recognised health emergency. Intensive care is an area with significant antimicrobial consumption, particularly increased utilisation of broad-spectrum antibacterials, making stewardship programmes essential. We aimed to explore antibacterial consumption, partnered with pathogen surveillance, over a five-year period (2018 to 2023) in a tertiary referral adult general intensive care unit (ICU). The mean number of admissions was 1645 per annum. A comparison between the ICU populations admitted before and after the COVID-19 pandemic peak (2020/21) identified several notable differences with increased average daily unit bed occupancy (21.6 vs. 25.2, respectively) and a higher proportion of admissions with sepsis (28.4% vs. 32.5%, respectively) in the post-pandemic period. Over the entire five years, the overall proportion of antibacterial use by the WHO AWaRe classification was 42.6% access, 54.7% watch and 2.6% reserve. One hundred and forty-seven positive blood culture isolates were reported, with the most concerning antibacterial resistance identified in 7.5% (9 Escherichia coli and 2 Klebsiella pneumoniae isolates). The COVID-19 pandemic peak year was associated with increased ICU bed occupancy, as well as a greater number of positive blood cultures but lower antibacterial consumption. Despite an increasingly complex workload, a large proportion of overall antibacterial consumption remained within the access category. However, the mortality rate and the incidence of most concerning antimicrobial resistance with respect to pathogens remained satisfyingly consistent, suggesting the positive consequences of real-world antibiotic stewardship in an intensive care setting. Full article
(This article belongs to the Special Issue Microbial Resistance, a Worldwide Concern a Global Sight)
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Review

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11 pages, 622 KiB  
Review
Exploring Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli in Food-Producing Animals and Animal-Derived Foods
by Laryssa Freitas Ribeiro, Natália Maramarque Nespolo, Gabriel Augusto Marques Rossi and John Morris Fairbrother
Pathogens 2024, 13(4), 346; https://doi.org/10.3390/pathogens13040346 - 22 Apr 2024
Cited by 5 | Viewed by 2660
Abstract
Antimicrobials serve as crucial treatments in both veterinary and human medicine, aiding in the control and prevention of infectious diseases. However, their misuse or overuse has led to the emergence of antimicrobial resistance, posing a significant threat to public health. This review focuses [...] Read more.
Antimicrobials serve as crucial treatments in both veterinary and human medicine, aiding in the control and prevention of infectious diseases. However, their misuse or overuse has led to the emergence of antimicrobial resistance, posing a significant threat to public health. This review focuses on extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli in animals and their associated food products, which contribute to the proliferation of antimicrobial-resistant strains. Recent research has highlighted the presence of ESBL-producing E. coli in animals and animal-derived foods, with some studies indicating genetic similarities between these isolates and those found in human infections. This underscores the urgent need to address antimicrobial resistance as a pressing public health issue. More comprehensive studies are required to understand the evolving landscape of ESBLs and to develop strategic public health policies grounded in the One Health approach, aiming to control and mitigate their prevalence effectively. Full article
(This article belongs to the Special Issue Microbial Resistance, a Worldwide Concern a Global Sight)
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