Molecular Characterization and Geographic Distribution of a Mymonavirus in the Population of Botrytis cinerea
Abstract
:1. Introduction
2. Materials and Methods
2.1. Fungal Strains, Culture Conditions, and Biological Characterization
2.2. dsRNA Extraction and Purification
2.3. cDNA Cloning and Sequencing
2.4. Sequence Analysis
2.5. Detection of BcMyV1 in B. cinerea Population
3. Results
3.1. B. cinerea Strain Ecan17-2 Exhibits Hypovirulence Traits
3.2. Genome Analysis of BcMyV1
3.3. Phylogenetic Analysis of BcMyV1
3.4. Incidence and Distribution of BcMyV1
4. Discussion
Supplementary Materials
Author Contributions
Funding
Conflicts of Interest
References
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Family | Virus | Acronym | aa Identity (%) | Accession no. | |
---|---|---|---|---|---|
Full Sequence | RdRp | ||||
Mymonaviridae | Sclerotinia sclerotiorum negative-stranded RNA virus 7 | SsNSRV7 | 99.85 | 100 | MF444285 |
Sclerotinia sclerotiorum negative-stranded RNA virus 1 | SsNSRV1 | 33.12 | 56.68 | NC_025383.1 | |
Sclerotinia sclerotiorum negative-stranded RNA virus 2 | SsNSRV2 | 22.28 | 41.45 | KP900931.1 | |
Sclerotinia sclerotiorum negative-stranded RNA virus 3 | SsNSRV3 | 33.57 | 56.15 | NC_026732.1 | |
Sclerotinia sclerotiorum negative-stranded RNA virus 4 | SsNSRV4 | 21.67 | 39.38 | KP900930.1 | |
Soybean leaf-associated negative-stranded RNA virus 1 | SlaNSRV1 | 32.75 | 59.36 | KT598225.1 | |
Soybean leaf-associated negative-stranded RNA virus 2 | SlaNSRV2 | 33.12 | 61.5 | KT598227.1 | |
Soybean leaf-associated negative-stranded RNA virus 3 | SlaNSRV3 | 21.43 | 37.31 | KT598228.1 | |
Soybean leaf-associated negative-stranded RNA virus 4 | SlaNSRV4 | 17.82 | 34.57 | KT598229.1 | |
Fusarium graminearum negative-stranded RNA virus 1 | FgNSRV1 | 32.75 | 59.36 | MF276904.1 | |
Bornaviridae | Jungle carpet python virus | JCPV | 14.84 | 24.6 | MF135780 |
Southwest carpet python virus | SWCPV | 14.33 | 21.93 | MF135781 | |
Loveridge’s garter snake virus 1 | LGSV1 | 14.28 | 23.53 | KM114265 | |
Variegated squirrel bornavirus 1 | VSBV1 | 14.16 | 25.13 | LN713681 | |
Rhabdoviridae | Rabies virus | RabV | 14.97 | 23.62 | AB517659 |
Maize mosaic virus | MMV | 15.19 | 23.12 | NC_005975.1 | |
Paramyxoviridae | Newcastle disease virus | NDV | 14.94 | 27.69 | JF827026.1 |
Measles virus | MV | 15.44 | 30.77 | NC_001498.1 | |
Nyamiviridae | Midway nyavirus | MIDMV | 15.81 | 26.42 | NC_012702.1 |
Nyamanini nyavirus | NYMV | 16.01 | 26.42 | NC_012703.1 | |
Filoviridae | Rose rosette virus | RRV | 10.57 | 11.4 | HQ871942 |
Raspberry leaf blotch virus | RLBV | 10.71 | 10.27 | FR823299 | |
Sunviridae | Reptile sunshinevirus 1 | RSV-1 | 14.26 | 24.26 | NC_025345 |
Pneumoviridae | Human respiratory syncytial virus | HRSV | 13.43 | 22.68 | NC_001781 |
Pneumonia virus of mice | PVM | 14.22 | 22.8 | NC_006579 |
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Hao, F.; Wu, M.; Li, G. Molecular Characterization and Geographic Distribution of a Mymonavirus in the Population of Botrytis cinerea. Viruses 2018, 10, 432. https://doi.org/10.3390/v10080432
Hao F, Wu M, Li G. Molecular Characterization and Geographic Distribution of a Mymonavirus in the Population of Botrytis cinerea. Viruses. 2018; 10(8):432. https://doi.org/10.3390/v10080432
Chicago/Turabian StyleHao, Fangmin, Mingde Wu, and Guoqing Li. 2018. "Molecular Characterization and Geographic Distribution of a Mymonavirus in the Population of Botrytis cinerea" Viruses 10, no. 8: 432. https://doi.org/10.3390/v10080432
APA StyleHao, F., Wu, M., & Li, G. (2018). Molecular Characterization and Geographic Distribution of a Mymonavirus in the Population of Botrytis cinerea. Viruses, 10(8), 432. https://doi.org/10.3390/v10080432