Evidence for West Nile Virus and Usutu Virus Infections in Wild and Resident Birds in Germany, 2017 and 2018
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sample Collection
2.2. Ethical Statement
2.3. Quantitative Real-Time Polymerase Chain Reaction (qRT-PCR) and Phylogenetic Analysis
2.4. Serological Investigations
2.5. Maps
3. Results
3.1. Quantitative Real-Time Polymerase Chain Reaction (qRT-PCR) Results
3.2. Phylogenetic Analysis of Usutu virus (USUV)-Positive Samples
3.3. Serological Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Order | Year 2017 | Year 2018 | Total |
---|---|---|---|
Passeriformes | 291 | 219 | 510 |
Accipitriformes/Falconiformes | 208 | 236 | 444 |
Strigiformes | 66 | 79 | 145 |
Anseriformes | 26 | 49 | 75 |
Columbiformes | 115 | 166 | 281 |
Apodiformes | 26 | 8 | 34 |
Charadriiformes | 25 | 49 | 74 |
Ciconiiformes/Pelicaniformes | 13 | 20 | 33 |
Gruiformes | 5 | 8 | 13 |
Piciformes | 47 | 34 | 81 |
Suliformes | 3 | 0 | 3 |
Galliformes | 2 | 0 | 2 |
Podicipediformes | 3 | 2 | 5 |
Coraciiformes | 5 | 0 | 5 |
Procellariiformes | 0 | 1 | 1 |
Cuculiformes | 0 | 1 | 1 |
Psittaciformes | 0 | 2 | 2 |
Total | 835 | 874 | 1709 |
Order | Common Name | Scientific Name | Migration Pattern | Housing | WNV qRT-PCR no.pos. | USUV qRT-PCR no.pos. | Federal State |
---|---|---|---|---|---|---|---|
(a) qRT-PCR results in 2017 | |||||||
Passeriformes | Eurasian Blackbird | Turdus merula | R, P | wild | 0 | 28 | SN, ST, BE, HE |
Common Starling | Sturnus vulgaris | R, P, S | wild | 0 | 1 | HE | |
Carrion Crow | Corvus corone | S | wild | 0 | 1 | NRW | |
Western Jackdaw | Coloeus monedula | R, P | wild | 0 | 1 | NRW | |
Piciformes | Great Spottet Woodpecker | Dendrocopos major | R, P, (S) | wild | 0 | 1 | LS |
in Total in 2017 | 0/826 | 32/826 | |||||
(b) qRT-PCR results in 2018 | |||||||
Passeriformes | Eurasian Blackbird | Turdus merula | R, P | wild | 0 | 13 | SN, LS, HE |
House Sparrow | Passer domesticus | R | wild | 0 | 1 | BW | |
Eurasian Bullfinch | Pyrrhula pyrrhula | / | captive | 0 | 2 | SN, SH | |
Domestic Canary | Serinus canaria forma domestica | / | captive | 0 | 1 | NRW | |
Grey-Headed Bullfinch | Pyrrhula erythaca | / | captive | 0 | 1 | LS | |
Song Thrush | Turdus philomelos | R, S | wild | 0 | 2 | SN | |
Common Starling | Sturnus vulgaris | R, P, S | wild | 0 | 1 | SN | |
Strigiformes | Great Grey Owl | Strix nebulosa | / | captive | 0 | 2 | BW, HE |
Little Owl | Athene noctua | R | wild | 0 | 1 | HE | |
Falconiformes | European Kestrel | Falco tinnunculus | R, P, S | wild | 0 | 1 | HE |
Total | 0/781 | 25/781 |
Order | Common Name | Scientific Name | Migration Pattern | Housing | USUV RNA Positive Birds |
---|---|---|---|---|---|
Passeriformes | Eurasian Blackbird | Turdus merula | R, P | wild | 94 |
Song Trush | Turdus philomelos | R, L | wild | 1 | |
Golden-breasted Starling | Cosmopsarus regius | / | captive | 1 | |
Strigiformes | Great Grey Owl | Strix nebulosa | / | captive | 2 |
Northern Hawk-owl | Surnia ulula | / | captive | 2 | |
in Total in 2017 | 100 |
Sample Collector | Order | Common Name | Scientific Name | Migration Pattern | No. Samples Tested | WNV Pos. (ND50) | USUV Pos. (ND50) |
---|---|---|---|---|---|---|---|
(a) WNV and USUV positive neutralization assay results (positives highlighted in red and bold) from wild bird serum in 2017. Cross-reacting antibody titers are also displayed in black | |||||||
① | Piciformes | Great Spottet Woodpecker | Dendrocopos major | R, P, (S) | 7 | 0 | 1 (10) |
② | Accipitriformes | Common Buzzard | Buteo buteo | R, P, S | 11 | 1 (10) | 0 |
② | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 29 | 2 (10), 1 (15) | 0 |
Feral Pigeon | Columba livia f. domestica | R, (P) | 14 | 1 (10) | 1 (20) | ||
② | Charadriiformes | Eurasian Woodcock | Scolopax rusticola | R, S | 3 | 1 (10) | 1 (20) |
② | Suliformes | Great Cormorant | Phalacrocorax carbo | R, S | 1 | 1 (10) | 0 |
Total | 171 | 5 | 3 | ||||
Seroprevalence | 2.92% | 1.75% | |||||
(b) WNV- and USUV-positive neutralization assay results (positives highlighted in red and bold) from wild bird serum in 2018. Cross-reacting antibody titers are also displayed in black | |||||||
① | Passeriformes | Eurasian Blackbird | Turdus merula | R, P | 16 | 1 (10), 1 (20), 1 (60) | 2 (10), 1 (15), 1 (40), 1 (60), 1 (240), 1 (320) |
① | Carrion Crow | Corvus corone | R, P | 14 | 1 (10) | 0 | |
① | Spotted Flycatcher | Muscicapa striata | L | 2 | 1 (10) | 0 | |
① | Accipitriformes | Northern Goshawk | Accipiter gentilis | R, P | 1 | 0 | 1 (10) |
① | Common Buzzard | Buteo buteo | R, P, S | 6 | 0 | 1 (40) | |
① | Anseriformes | Northern Mallard Duck | Anas platyrhynchos | R, P, S | 5 | 1 (20) | 1 (10), 1 (480) |
① | Ciconiiformes/ Pelicaniformes | Northern Gannet | Morus bassanus | S, L | 6 | 1 (10) | 0 |
② | Passeriformes | Eurasian Blackbird | Turdus merula | R, P | 9 | 1 (120), 1 (240) | 1 (10), 1 (240), 1 (1280) |
② | Eurasian Jay | Garrulus glandarius | R, P | 3 | 1 (15), 1 (40) | 1 (1280) | |
② | Common Magpie | Pica pica | R | 5 | 1 (15) | 0 | |
② | Common Starling | Sturnus vulgaris | R, P, S | 2 | 1 (40) | 1 (240) | |
② | Accipitriformes | Common Buzzard | Buteo buteo | R, P, S | 11 | 2 (15) | 0 |
② | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 48 | 1 (10), 1 (15), 1 (20), 1 (40) | 1 (40), 3 (80) |
② | Apodiformes | Common Swift | Apus apus | L | 1 | 0 | 1 (10) |
③ | Strigiformes | Eurasian Eagle Owl | Bubo bubo | zoo bird | 5 | 0 | 1 (30), 1 (20), 1 (15) |
③ | Snowy Owl | Bubo scandiacus | zoo bird | 2 | 0 | 1 (640) | |
③ | Ural Owl | Strix uralensis | zoo bird | 2 | 1 (30) | 1 (320) | |
③ | Northern Long-eared Owl | Asio otus | zoo bird | 3 | 1 (20) | 1 (80) | |
③ | Eurasian Tawny Owl | Strix aluco | zoo bird | 2 | 1 (10), 1 (60) | 1 (160), 1 (2560) | |
Total | 304 | 7 | 29 | ||||
Seroprevalence | 2.30% | 9.54% |
Sample Collector | Order | Common Name | Scientific Name | Migration Pattern | No. Samples Tested | WNV Pos. (ND50) | USUV Pos. (ND50) |
---|---|---|---|---|---|---|---|
(a) WNV- and USUV-positive neutralization assay results (positives highlighted in red and bold) from wild bird serum in 2017. Cross-reacting antibody titers are also displayed in black | |||||||
④ | Charadriiformes | Eurasian Woodcock | Scolopax rusticola | R, S | 7 | 2 (10), 1 (20) | 1 (10), 1 (25), 1 (30), 1 (40) |
④ | Ciconiiformes/Pelicaniformes | Grey Heron | Ardea cinerea | R, P, S | 1 | 0 | 1 (10) |
⑤ | Passeriformes | Eurasian Blackbird | Turdus merula | R, P | 11 | 1 (10), 1 (15), 1 (20) | 1 (20), 1 (40), 1 (50), 1 (80) |
⑤ | Falconiformes | European Kestrel | Falco tinnunculus | R, P, S | 5 | 1 (20), 1 (80) | 0 |
⑤ | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 9 | 3 (10), 1 (60) | 2 (20), 1 (30), 1 (80), 1 (320), 1 (480) |
⑤ | Ciconiiformes/Pelicaniformes | White Stork | Ciconia ciconia | L | 1 | 1 (20) | 1 (40) |
Total | 76 | 2 | 16 | ||||
Seroprevalence | 2.63% | 21.05% | |||||
(b) WNV- and USUV-positive neutralization assay results (positives highlighted in red and bold) from wild bird serum in 2018. Cross-reacting antibody titers are also displayed in black | |||||||
④ | Passeriformes | Common Magpie | Pica pica | R | 1 | 0 | 1 (10) |
④ | Accipitriformes | Northern Goshawk | Accipiter gentilis | R, P | 2 | 1 (320) | 0 |
④ | White-tailed Eagle | Haliaeetus albicilla | R, P | 5 | 1 (240) | 0 | |
④ | Common Buzzard | Buteo buteo | R, P, S | 7 | 1 (20) | 1 (10) | |
④ | Falconiformes | European Kestrel | Falco tinnunculus | R, P, S | 1 | 1 (160) | 1 (40) |
④ | Strigiformes | Northern Long-eared Owl | Asio otus | R, P, S | 2 | 1 (10) | 1 (60) |
④ | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 2 | 0 | 1 (10) |
④ | Anseriformes | Northern Mallard Duck | Anas platyrhynchos | R, P, S | 2 | 0 | 1 (10) |
④ | Apodiformes | Common Swift | Apus apus | L | 1 | 1 (10) | 1 (30) |
④ | Charadriiformes | Eurasian Woodcock | Scolopax rusticola | R, S | 12 | 0 | 1 (10) |
⑤ | Passeriformes | Eurasian Blackbird | Turdus merula | R, P | 3 | 0 | 1 (60) |
⑤ | Carrion Crow | Corvus corone | P, S | 5 | 1 (240) | 1 (40) | |
⑤ | Accipitriformes | Common Buzzard | Buteo buteo | R, P, S | 2 | 0 | 1 (60), 1 (10) |
⑤ | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 7 | 1 (80), 1 (60), 1 (30) | 1 (320), 1 (80), 1 (30), 1 (10) |
Total | 92 | 6 | 12 | ||||
Seropevalence | 6.52% | 13.04% |
Sample Collector | Order | Common Name | Scientific Name | Migration Pattern | No. Samples Tested | WNV Pos. (ND50) | USUV Pos. (ND50) |
---|---|---|---|---|---|---|---|
(a) WNV- and USUV-positive neutralization assay results (positives highlighted in red and bold) from wild bird serum in 2017. Cross-reacting antibody titers are also displayed in black | |||||||
⑤ | Passeriformes | Eurasian Blackbird | Turdus merula | R, P | 4 | 1 (75), 1 (190) | 1 (160), 1 (3840) |
⑥ | Passeriformes | Eurasian Blackbird | Turdus merula | R, P | 23 | 1 (15) | 0 |
⑥ | Eurasian Blue Tit | Cyanistes caeruleus | R | 2 | 1 (10) | 0 | |
⑥ | Thrush | Turdus sp. | R, S | 10 | 1 (10) | 1 (15) | |
⑥ | Common Starling | Sturnus vulgaris | R, P, S | 5 | 1 (10) | 0 | |
⑥ | Accipitriformes | Long-legged Buzzard | Buteo rufinus | zoo bird | 2 | 0 | 1 (10) |
⑥ | Common Buzzard | Buteo buteo | R, P, S | 24 | 2 (10), 1 (10) | 1 (60), 1 (15) | |
⑥ | African Sea Eagle | Haliaeetus vocifer | zoo bird | 3 | 1 (30) | 0 | |
⑥ | Black Kite | Milvus migrans | L | 2 | 1 (10) | 0 | |
⑥ | Falconiformes | European Kestrel | Falco tinnunculus | R, P, S | 21 | 2 (15), 1 (30) | 0 |
⑥ | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 16 | 0 | 2 (10), 1 (60) |
⑥ | Apodiformes | Common Swift | Apus apus | L | 10 | 1 (10) | 1 (15) |
⑥ | Ciconiiformes/Pelicaniformes | Grey Heron | Ardea cinerea | R, P, S | 7 | 1 (15) | 1 (40) |
⑥ | Stork sp. | Circonia sp. | L | 1 | 1 (10) | 0 | |
⑦ | Gruiformes | Eurasian coot | Fulica atra | P, S | 1 | 1 (15) | 1 (30) |
⑧ | Accipitriformes | Common Buzzard | Buteo buteo | R, P, S | 13 | 1 (20), 1 (10) | 2 (320), 1 (20), 1 (15), 1 (10) |
⑧ | Northern Goshawk | Accipiter gentilis | R, P | 2 | 0 | 1 (15) | |
⑧ | Strigiformes | Eurasian Tawny Owl | Strix aluco | R | 2 | 0 | 1 (80) |
⑧ | Gruiformes | Eurasian Coot | Fulica atra | P, S | 1 | 1 (10) | 0 |
Total | 492 | 15 | 19 | ||||
Seroprevalence | 3.05% | 3.86% | |||||
(b) WNV- and USUV-positive neutralization assay results (positives highlighted in red and bold) from wild bird serum in 2018. Cross-reacting antibody titers are also displayed in black | |||||||
⑥ | Passeriformes | Eurasian Blackbird | Turdus merula | R, P, S | 19 | 2 (15), 1 (60), 1 (10) | 1 (320), 1 (30), 1 (20) |
⑥ | Common Magpie | Pica pica | R | 6 | 1 (15) | 0 | |
⑥ | Carrion Crow | Corvus corone | P, S | 9 | 1 (40) | 0 | |
⑥ | European Robin | Erithacus rubecula | P | 2 | 0 | 1 (15) | |
⑥ | Accipitriformes/Falconiformes | Black-chested Buzzard-eagle | Geranoaetus melanoleucus | zoo bird | 1 | 0 | 1 (10) |
⑥ | Griffon Vulture | Gyps fulvus | zoo bird | 4 | 0 | 1 (15) | |
⑥ | Northern Goshawk | Accipiter gentilis | R, P | 12 | 0 | 1 (10) | |
⑥ | Eastern Imperial Eagle | Aquila heliaca | zoo bird | 1 | 0 | 1 (15) | |
⑥ | Common Buzzard | Buteo buteo | R, P, S | 25 | 0 | 1 (15), 1 (20) | |
⑥ | Western Marsh Harrier | Circus aeruginosus | L | 6 | 1 (40), 1 (20) | 1 (10) | |
⑥ | Southern Crested Caracara | Caracara plancus | zoo bird | 1 (10) | 0 | ||
⑥ | Rüppell′s Vulture | Gyps rueppelli | zoo bird | 1 | 1 (15) | 1 (50) | |
⑥ | Golden Eagle | Aquila chrysaetos | zoo bird | 4 | 0 | 1 (60) | |
⑥ | White-backed Vulture | Gyps africanus | zoo bird | 1 | 1 (20) | 0 | |
⑥ | Eurasian Hobby | Falco subbuteo | L | 2 | 1 (30) | 0 | |
⑥ | European Kestrel | Falco tinnunculus | R, P, S | 14 | 1 (20) | 0 | |
⑥ | Strigiformes | Northern Long-eared Owl | Asio otus | R, P, S | 4 | 0 | 1 (30) |
⑥ | Columbiformes | Common Wood Pigeon | Columba palumbus | R, P, S | 21 | 1 (40) | 1 (80) |
⑥ | Feral Pigeon | Columba livia f. domestica | R, (P) | 13 | 0 | 2 (10), 1 (15) | |
⑥ | Anseriformes | Mute Swan | Cygnus olor | R, P, S | 9 | 1 (10) | 1 (15), 1 (40) |
⑥ | Egyptian Goose | Alopochen aegyptiacus | R (Neozoa) | 2 | 0 | 1 (10) | |
⑥ | Ciconiiformes/Pelicaniformes | Grey Heron | Ardea cinerea | R, P, S | 8 | 0 | 1 (10), 1 (40) |
⑥ | Cuculiformes | Common Cuckoo | Cuculus canorus | L | 1 | 1 (20) | 0 |
⑥ | Piciformes | Great Spottet Woodpecker | Dendrocopos major | R, P, (S) | 6 | 1 (10) | 0 |
⑦ | Columbiformes | Feral Pigeon | Columba livia f. domestica | R, (P) | 16 | 0 | 1 (30) |
⑧ | Accipitriformes | Common Buzzard | Buteo buteo | R, P, S | 3 | 0 | 1 (15) |
⑧ | Falconiformes | European Kestrel | Falco tinnunculus | R, P, S | 1 | 0 | 1 (30) |
Total | 398 | 13 | 26 | ||||
Seroprevalence | 3.27% | 6.53% |
Sample Collector | Year | Common Name | Scientific Name | WNV pos. (ND50) | USUV pos. (ND50) |
---|---|---|---|---|---|
② | 2017 | Common Wood Pigeon | Columba palumbus | 1 (10) | 1 (15) |
② | 2017 | Common Wood Pigeon | Columba palumbus | 1 (10) | 1 (15) |
⑤ | 2017 | Eurasian Blackbird | Turdus merula | 1 (15) | 1 (20) |
⑤ | 2017 | Eurasian Blackbird | Turdus merula | 1 (160) | 1 (240) |
⑥ | 2017 | Northern Goshawk | Accipiter gentilis | 1 (15) | 1 (10) |
⑥ | 2017 | European Kestrel | Falco tinnunculus | 1 (15) | 1 (15) |
⑥ | 2017 | Snowy owl | Bubo scandiacus | 1 (10) | 1 (10) |
① | 2018 | Eurasian Blackbird | Turdus merula | 1 (30) | 1 (40) |
⑥ | 2018 | Eurasian Blackbird | Turdus merula | 1 (30) | 1 (30) |
⑥ | 2018 | Eurasian Blackbird | Turdus merula | 1 (10) | 1 (10) |
⑥ | 2018 | Eurasian Blackbird | Turdus merula | 1 (20) | 1, (15) |
⑥ | 2018 | House Sparrow | Passer domesticus | 1 (60) | 1 (80) |
⑥ | 2018 | Great Grey Owl | Strix nebulosa | 1 (30) | 1 (20) |
⑥ | 2018 | Stork sp. | Circonia sp. | 1 (10) | 1 (15) |
© 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
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Michel, F.; Sieg, M.; Fischer, D.; Keller, M.; Eiden, M.; Reuschel, M.; Schmidt, V.; Schwehn, R.; Rinder, M.; Urbaniak, S.; et al. Evidence for West Nile Virus and Usutu Virus Infections in Wild and Resident Birds in Germany, 2017 and 2018. Viruses 2019, 11, 674. https://doi.org/10.3390/v11070674
Michel F, Sieg M, Fischer D, Keller M, Eiden M, Reuschel M, Schmidt V, Schwehn R, Rinder M, Urbaniak S, et al. Evidence for West Nile Virus and Usutu Virus Infections in Wild and Resident Birds in Germany, 2017 and 2018. Viruses. 2019; 11(7):674. https://doi.org/10.3390/v11070674
Chicago/Turabian StyleMichel, Friederike, Michael Sieg, Dominik Fischer, Markus Keller, Martin Eiden, Maximilian Reuschel, Volker Schmidt, Rebekka Schwehn, Monika Rinder, Sylvia Urbaniak, and et al. 2019. "Evidence for West Nile Virus and Usutu Virus Infections in Wild and Resident Birds in Germany, 2017 and 2018" Viruses 11, no. 7: 674. https://doi.org/10.3390/v11070674
APA StyleMichel, F., Sieg, M., Fischer, D., Keller, M., Eiden, M., Reuschel, M., Schmidt, V., Schwehn, R., Rinder, M., Urbaniak, S., Müller, K., Schmoock, M., Lühken, R., Wysocki, P., Fast, C., Lierz, M., Korbel, R., Vahlenkamp, T. W., Groschup, M. H., & Ziegler, U. (2019). Evidence for West Nile Virus and Usutu Virus Infections in Wild and Resident Birds in Germany, 2017 and 2018. Viruses, 11(7), 674. https://doi.org/10.3390/v11070674