Torque Teno Virus (TTV) in Renal Transplant Recipients: Species Diversity and Variability
Abstract
:1. Introduction
2. Materials and Methods
2.1. Plasma Samples
2.2. TTV Detection and Quantification
2.3. TTV Genotyping
2.4. Phylogenetic Analysis
2.5. Statistical Analysis
3. Results
3.1. TTV Diversity
3.1.1. TTV Species Diversity and Viral Load
3.1.2. TTV Species Diversity and Patient Characteristics
3.2. TTV Variability
3.3. TTV Species and Viral Infection or Graft Rejection
3.4. Other Anelloviruses Detection
4. Discussion
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Characteristics | Renal Transplant Patients (n = 27) |
---|---|
Age, years old [mean ± SD] | 49.4 ± 13.9 |
Gender (female) [n (%)] | 14 (51.8) |
Number of kidney transplantation [n (%)] | |
First | 22 (81.5) |
Second | 4 (14.8) |
Third | 1 (3.7) |
Cause of end-stage renal disease [n (%)] | |
Diabetes mellitus | 5 (18.5)) |
Glomerular disease | 7 (25.9) |
Hypertensive kidney disease | 2 (7.4) |
Polycystic kidney disease | 2 (7.4) |
Other specified disorders of the kidney and ureter | 2 (7.4) |
Unspecified chronic renal failure | 9 (33.3) |
CMV serostatus [n (%)] | |
D+/R+ | 22 (81.5) |
D−/R+ | 2 (7.4) |
D+/R− | 3 (11.1) |
D−/R− | - |
Pre-transplant renal replacement therapy [n (%)] | |
Hemodialysis | 23 (85.2) |
Time on dialysis, months [median (IQR)] | 30.6 (16.3–53.2) |
Donor age, years old [mean ± SD] | 43.5 ± 20.2 |
Donor gender (male) [n (%)] | 17 (63.0) |
Type of donor [n (%)] | |
Deceased donor | 20 (74.1) |
Living donor | 7 (25.9) |
Number of HLA mismatches [median (IQR)] | 5 (4–5) |
Induction therapy [n (%)] | |
Thymoglobulin | 26 (96.3) |
Basiliximab | 1 (3.7) |
Initial maintenance immunosuppression scheme [n (%)] | |
Tacrolimus, mycophenolic acid and steroids | 27 (100) |
TTV Species | n Samples | Prevalence (%) |
---|---|---|
TTV 3 | 19 | 63.3 |
TTV 24 (TTV 22 *, TTV 23 * and TTV 24) | 16 | 53.3 |
TTV 9 (TTV 9, TTV 11 * and TTV 12 *) | 11 | 46.7 |
TTV 13 | 13 | 43.3 |
TTV 18 | 13 | 43.3 |
TTV 5 | 11 | 36.7 |
TTV 1 | 9 | 30.0 |
TTV 15 (TTV 15 and TTV 16 *) | 9 | 30.0 |
TTV 29 (TTV 27 *, TTV 28 * and TTV 29) | 9 | 30.0 |
TTV 21 | 6 | 20.0 |
TTV 17 | 3 | 10.0 |
TTV 19 | 3 | 10.0 |
TTV 20 | 3 | 10.0 |
TTV 6 | 1 | 3.3 |
TTV 10 | 1 | 3.3 |
n Patients | ID Samples | Time after Transplantation (month) | TTV Viral Load (Log10 copies/mL) | n TTV Species | Anelloviruses | Viral Infection (Virus, Days after Transplantation) | Graft Rejection (Days after Transplantation) | ||
---|---|---|---|---|---|---|---|---|---|
Home Brew PCR | R-GENE® PCR | TTV Species | Other Anelloviruses | ||||||
1 | M 1_50945 | Pre Tx | 5.4 | 5.0 | 6 | 3, 13, 15, 17, 18, 29 | - | NO | NO |
2 | M 2_48365 | Pre Tx | 4.3 | 3.9 | 8 | 1, 9 (11/12), 13, 17, 18, 19, 21, 24 | - | NO | NO |
3 | M 3_10226 | Pre Tx | 5.0 | 3.9 | 5 | 1, 3, 9 (11/12) *, 13, 24 (22/24) * | - | NO | NO |
4 | M 4_50378 | Pre Tx | 4.7 | 4.0 | 6 | 3, 9 (12), 13, 15 (16), 18, 24 | - | NO | NO |
5 | M 5_46007 | Pre Tx | 4.4 | 4.0 | 4 | 13, 15 (16), 18, 24 | - | NO | NO |
6 | M 6_53410 | Pre Tx | 4.2 | 2.9 | 4 | 3, 9 (12), 15 (16), 20 | - | YES (CMV, +163) | YES (+38) |
7 | M 7_48016 | Pre Tx | 5.6 | 4.9 | 8 | 1, 3, 5, 9 (11/12) *, 10, 13, 19, 24 | - | NO | NO |
8 | M 8_10348 | Pre Tx | 4.6 | 4.2 | 5 | 3, 13, 18, 24, 29 | - | YES (BKPyV, +101) | NO |
9 | M 9_49489 | Pre Tx | 4.3 | 4.1 | 10 | 3, 5, 13, 15 (16), 17, 18, 20, 21, 24 (22,24), 29 | - | NO | NO |
10 | M 10_51173 | 1 | 3.9 | 0.0 | 3 | 3, 9 (12), 13 | - | NO | NO |
11 | M 11_49748 | 1 | 4.6 | 2.3 | 7 | 1, 5, 9 (12), 13, 15 (16), 24 (22), 29 | - | NO | NO |
12 | M 12_53806 | 3 | 8.5 | 7.0 | 5 | 3, 5, 15, 18, 21 | - | YES (CMV, +105) | NO |
13 | M 13_49964 | 3 | 8.2 | 7.8 | 4 | 1, 3, 18, 21 | - | NO | YES (+220) |
14 | M 14_51577 | 3 | 8.2 | 7.7 | 7 | 3, 6, 9 (11), 18, 21, 24, 29 (28) | - | YES (BKPyV, +156) | YES (+36) |
15 | M 15_50343 | 3 | 8.5 | 7.7 | 2 | 15 (16), 29 (28/29) * | - | NO | NO |
16 | M 16_47955 | 3 | 8.5 | 6.7 | 2 | 3, 5 | - | NO | NO |
17 | M 17_46592 | 3 | 8.2 | 7.2 | 7 | 3, 5, 9 (11), 13, 18, 24 (22), 29 (28) | - | YES (CMV, +221) | NO |
18 | M 18_48748 | 6 | 3.7 | 6.1 | 2 | 3, 5 | TTMDV | NO | NO |
19 | M 19_49833 | 6 | 8.5 | 6.9 | 1 | 3 | - | NO | NO |
20 | M 20_49667 | 6 | 7.3 | 5.5 | 7 | 1, 3, 9, 18, 21, 24, 29 (27) | - | NO | NO |
21 | M 21_10232 | 6 | 8.4 | 7.6 | 2 | 3, 24 | - | NO | YES (+52) |
22 | M 22_10175 | 12 | 4.1 | 7.1 | 5 | 1, 5, 13, 18, 21 | TTMDV | NO | NO |
23 | M 23_11085 | 12 | 6.9 | 5.0 | 2 | 20, 24 (22) | - | NO | YES (+86) |
24 | M 24_10839 | 12 | 8.6 | 7.2 | 2 | 5, 24 | - | NO | NO |
25 | M 25_46868 | Pre Tx | 4.0 | 3.4 | 4 | 1, 3, 9 (12), 13 | - | NO | NO |
M 26_51364 | 12 | 8.4 | 7.2 | 1 | 19 | - | |||
26 | M 27_51795 | Pre Tx | 3.6 | 4.3 | 5 | 1, 5, 15 (16), 18, 29 | - | NO | NO |
M 28_10274 | 6 | 3.0 | 8.9 | 0 | TTMV | ||||
27 | M 29_46175 | Pre Tx | 6.4 | 5.5 | 2 | 3, 5 | - | YES (BKPyV, +307) | NO |
M 30_49183 | 9 | 8.1 | 7.2 | 1 | 21 | - |
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Reyes, N.S.; Spezia, P.G.; Jara, R.; Filippini, F.; Boccia, N.; García, G.; Hermida, E.; Poletta, F.A.; Pistello, M.; Laham, G.; et al. Torque Teno Virus (TTV) in Renal Transplant Recipients: Species Diversity and Variability. Viruses 2024, 16, 432. https://doi.org/10.3390/v16030432
Reyes NS, Spezia PG, Jara R, Filippini F, Boccia N, García G, Hermida E, Poletta FA, Pistello M, Laham G, et al. Torque Teno Virus (TTV) in Renal Transplant Recipients: Species Diversity and Variability. Viruses. 2024; 16(3):432. https://doi.org/10.3390/v16030432
Chicago/Turabian StyleReyes, Noelia Soledad, Pietro Giorgio Spezia, Raquel Jara, Fabio Filippini, Natalia Boccia, Gonzalo García, Eliana Hermida, Fernando Adrian Poletta, Mauro Pistello, Gustavo Laham, and et al. 2024. "Torque Teno Virus (TTV) in Renal Transplant Recipients: Species Diversity and Variability" Viruses 16, no. 3: 432. https://doi.org/10.3390/v16030432
APA StyleReyes, N. S., Spezia, P. G., Jara, R., Filippini, F., Boccia, N., García, G., Hermida, E., Poletta, F. A., Pistello, M., Laham, G., Maggi, F., & Echavarria, M. (2024). Torque Teno Virus (TTV) in Renal Transplant Recipients: Species Diversity and Variability. Viruses, 16(3), 432. https://doi.org/10.3390/v16030432