Molecular Prevalence and Genetic Diversity Based on Msp1a Gene of Anaplasma ovis in Goats from Türkiye
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Locations and Design
2.2. Collection of Blood and Tick Samples
2.3. DNA Extraction, PCR Amplification and Reverse Line Blot (RLB) Hybridization
2.4. Msp1a PCR
2.5. Sequencing, and Statistical Analysis
3. Results
3.1. Tick Infestation
3.2. Anaplasma ovis Has Been Shown a High Prevalence in Field Samples
3.3. Three New Tandem Repeats Were Described in A. ovis MSP1a Protein Sequences
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Location | No. Infected | |||
---|---|---|---|---|
Province | Villages | No. Tested | No. Positive (%) | 95% CI |
Antalya | Elikesik | 16 | 15 (93.8) | 69.8–99.8 |
Payallar | 19 | 12 (63.2) | 38.4–83.7 | |
Asmaca | 20 | 13 (65.0) | 40.8–84.6 | |
Gençler | 20 | 8 (40.0) | 19.1–63.9 | |
Güçlüköy | 36 | 19 (52.8) | 35.5–69.6 | |
Yarpuz | 14 | 2 (14.3) | 1.8–42.8 | |
Saraçlı | 16 | 8 (50.0) | 24.7–75.3 | |
Güzelyalı | 14 | 10 (71.4) | 41.9–91.6 | |
Yavrudoğan | 7 | 2 (28.6) | 3.7–71.0 | |
Gebece | 9 | 2 (22,2) | 2.8–60.0 | |
Susuzşahap | 15 | 1 (6.7) | 0.2–31.9 | |
Oymapınar | 11 | 5 (45.5) | 16.7–76.6 | |
Sevinçköy | 10 | 1 (10.0) | 0.3–44.5 | |
Yaylaalan | 13 | 4 (30.8) | 9.1–61.4 | |
Mersin | Narince | 20 | 5 (25.0) | 8.7–49.1 |
Derebaşı | 10 | 4 (40.0) | 12.2–73.8 | |
Çarıklar | 20 | 16 (80.0) | 56.3–94.3 | |
Emirşah | 13 | 3 (23.1) | 5.0–53.8 | |
Güneybahşiş | 10 | 5 (50.0) | 18.7–81.3 | |
Total | 293 | 135 (46.1) | 40.3–52.0 |
Presence of Ticks on the Goats | |||
---|---|---|---|
No | Yes | ||
Number | 293 | 99 (33.8%) | 194 (66.2%) |
Positive | 135 (46.07%) | 47 (34.8) | 88 (65.2%) |
Negative | 158 (53.92%) | 52 (32.9%) | 106 (67.1%) |
p-value | 0.73133 |
Isolates | Repeat Form | Number of Repeats | Number of aa | Accession Number | BLAST Analysis |
---|---|---|---|---|---|
Akseki1 | Ao8 | 1 | 43 | OL470956 | 99.7% A. ovis (MG693756) |
Akseki2 | Ao8 | 1 | 43 | OL470959 | 99.4% A. ovis (MG693738) |
Akseki53 | Ao8 | 1 | 43 | OL470947 | 100.0% A.ovis (MG693738) |
Akseki65 | Ao18 | 1 | 33 | OL470946 | 98.6% A. ovis (MG693760) |
Alanya13 | Ao8 | 1 | 43 | OL470949 | 100.0% A. ovis (MG693738) |
Alanya14 | Ao8 | 1 | 43 | OL470961 | 100.0% A. ovis (MG693738) |
Alanya39 | Ao8 | 1 | 43 | OL470941 | 99.4% A. ovis (MG693738) |
Alanya49 | AoTr15 | 1 | 43 | OL470953 | 99.4% A. ovis (MG693738) |
Alanya50 | Ao8 | 1 | 43 | OL470942 | 99.4% A. ovis (MG693738) |
Alanya60 | AoTr16 | 1 | 33 | OL470944 | 97.5% A. ovis (MG693760) |
Anamur7 | Ao8 | 1 | 43 | OL470957 | 100.0% A. ovis (MG693738) |
Anamur10 | AoTr16 | 1 | 33 | OL470950 | 97.5% A. ovis (MG693760) |
Anamur55 | AoTr15 | 1 | 43 | OL470951 | 98.7% A. ovis (MG693738) |
Bozyazi26 | AoTr15 | 1 | 43 | OL470945 | 98.7% A. ovis (MG693738) |
Bozyazi28 | Ao18 | 1 | 33 | OL470955 | 98.6% A. ovis (MG693760) |
Cetin6 | Ao8 | 1 | 43 | OL470958 | 100.0% A. ovis (MG693738) |
Manavgat83 | AoTr15 | 1 | 43 | OL470948 | 98.7% A. ovis (MG693738) |
Manavgat89 | Ao8 | 1 | 43 | OL470960 | 99.4% A. ovis (MG693738) |
Manavgat90 | AoTr17 | 1 | 43 | OL470952 | 98.7% A. ovis (MG693738) |
Manavgat95 | Ao8 | 1 | 43 | OL470943 | 99.4% A. ovis (MG693738) |
Manavgat130 | Ao18 | 1 | 33 | OL470954 | 98.6% A. ovis (MG693760) |
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Ulucesme, M.C.; Ozubek, S.; Aktas, M. Molecular Prevalence and Genetic Diversity Based on Msp1a Gene of Anaplasma ovis in Goats from Türkiye. Life 2023, 13, 1101. https://doi.org/10.3390/life13051101
Ulucesme MC, Ozubek S, Aktas M. Molecular Prevalence and Genetic Diversity Based on Msp1a Gene of Anaplasma ovis in Goats from Türkiye. Life. 2023; 13(5):1101. https://doi.org/10.3390/life13051101
Chicago/Turabian StyleUlucesme, Mehmet Can, Sezayi Ozubek, and Munir Aktas. 2023. "Molecular Prevalence and Genetic Diversity Based on Msp1a Gene of Anaplasma ovis in Goats from Türkiye" Life 13, no. 5: 1101. https://doi.org/10.3390/life13051101
APA StyleUlucesme, M. C., Ozubek, S., & Aktas, M. (2023). Molecular Prevalence and Genetic Diversity Based on Msp1a Gene of Anaplasma ovis in Goats from Türkiye. Life, 13(5), 1101. https://doi.org/10.3390/life13051101