Conservation and Management of Marine Ecosystems

Based on the field survey and reference data of the sea area of the Zhongjieshan Islands from 2021 to 2022, the Ecopath model was used to analyze the energy flow structure of the marine ecosystem of the sea area of the Zhongjieshan Islands; the energy structure of the marine ecosystem was divided into 21 functional groups, and its nutrient structure, energy flow, and total system characteristics were analyzed. The results show that the credibility of the model is 0.414, which is at a medium level. The trophic level of each functional group of the ecosystem in the sea area of Zhongjieshan Islands was 1–3.48, the energy flow structure of the system was mainly concentrated in the first five grades, and the trophic level was relatively simple, with the average energy transfer efficiency of the system being 8.11%, the energy flow range being 2.81–13.04%, the energy transfer efficiency of the primary producers of the system being 7.25%, and the energy conversion efficiency of the system debris being 9.12%. The total system throughput was 2125.96 t·km⁻²; The analysis of the overall characteristics of the ecosystem showed that the system connectance index and the system omnivory index were 0.45 and 0.24, respectively, while the Finn’s cycling index was 8.24, the Finn’s mean path length of the system was 2.72, and the total primary production/total respiration was 1.71. In this study, the marine ecosystem model of the sea area of the Zhongjieshan Islands was studied to understand the trophic structure and ecosystem status of the sea area, which is conducive to the sustainable utilization and scientific management of fishery resources in the sea area. Full article

Coral reefs are vital to marine biodiversity but are increasingly threatened by global climate change and human activities, leading to significant declines in live coral cover (LCC). Monitoring LCC is crucial for assessing the health of coral reef ecosystems and understanding their degradation and recovery. Traditional methods for estimating LCC, such as the manual interpretation of underwater survey videos, are labor-intensive and time-consuming, limiting their scalability for large-scale ecological monitoring. To overcome these challenges, this study introduces an innovative deep learning-based approach that utilizes semantic segmentation to automatically interpret LCC from underwater videos. That is, we enhanced PSPNet for live coral segmentation by incorporating channel and spatial attention mechanisms, along with pixel shuffle modules. Experimental results demonstrated that the proposed model achieved a mean Intersection over Union (mIoU) of 89.51% and a mean Pixel Accuracy (mPA) of 94.47%, showcasing superior accuracy in estimating LCC compared to traditional methods. Moreover, comparisons indicated that the proposed model aligns more closely with manual interpretations than other models, with an mean absolute error of 4.17%, compared to 5.89% for the original PSPNet, 6.03% for Deeplab v3+, 7.12% for U-Net, and 6.45% for HRNet, suggesting higher precision in LCC estimation. By automating the estimation of LCC, this deep learning-based approach can greatly enhance efficiency, thereby contributing significantly to global conservation efforts by enabling more scalable and efficient monitoring and management of coral reef ecosystems. Full article

Invasive marine invertebrates are increasingly recognized as a potential disturbance to coastal ecosystems. We sought to better document the taxonomic composition of subtidal communities around Long Island to obtain a baseline that can be used to monitor current and future invasions of non-indigenous species. We placed settlement blocks at 18 sites along the coast of Long Island, New York, for three months. After recovering blocks at 12 sites, we analyzed the taxonomic composition of fouling communities on the blocks. We observed 64 invertebrate and 3 algal taxa, with large variation in taxon richness among sites. Multivariate analyses revealed that although taxon composition was significantly dissimilar between north and south shores, variation in dissimilarity did not differ significantly between shores. The high variability in taxon composition observed among sites indicates that additional research is needed to expand our knowledge of invertebrate diversity in the waters surrounding Long Island. Adding more sites and replicate blocks within sites could improve future sampling designs. This research will benefit continuing efforts to monitor, manage, and prevent the establishment of marine invasive species. Full article

Submarine groundwater discharge (SGD) is a recognized contributor to the hydrological and biogeochemical functioning of coral reef ecosystems located along coastlines. However, the distribution, size, and thermal properties of SGD remain poorly understood at most land–reef margins. We developed, deployed, and demonstrated an operational method for airborne detection and mapping of SGD using the 200 km coastline of western Hawai‘i Island as a testing and analysis environment. Airborne high spatial resolution (1 m) thermal imaging produced relative sea surface temperature (SST) maps that aligned geospatially with boat-based transects of SGD presence–absence. Boat-based SST anomaly measurements were highly correlated with airborne SST anomaly measurements (R² = 0.85; RMSE = 0.04 °C). Resulting maps of the relative difference in SST inside and outside of SGD plumes, called delta-SST, revealed 749 SGD plumes in 200 km of coastline, with nearly half of the SGD plumes smaller than 0.1 ha in size. Only 9% of SGD plumes were ≥1 ha in size, and just 1% were larger than 10 ha. Our findings indicate that small SGD is omnipresent in the nearshore environment. Furthermore, we found that the infrequent, large SGD plumes (>10 ha) displayed the weakest delta-SST values, suggesting that large discharge plumes are not likely to provide cooling refugia to warming coral reefs. Our operational approach can be applied frequently over time to generate SGD information relative to terrestrial substrate, topography, and pollutants. This operational approach will yield new insights into the role that land-to-reef interactions have on the composition and condition of coral reefs along coastlines. Full article

Coral reefs worldwide are under increasing levels of pressure due to global and local stressors. Long-term monitoring of coral reefs through repeated observations at fixed survey sites allows scientists to assess temporal patterns in coral-reef communities and plays important roles in informing managers of the state of the ecosystems. Here, we describe coral assemblages in Papahānaumokuākea, the largest contiguous fully protected marine conservation area in the United States, using long-term monitoring data collected from 20 permanent (fixed) sites at three islands/atolls, Lalo, Kapou and Manawai, between 2014 and 2021. Significant temporal shifts in coral colony composition were detected at some of the monitoring sites, which were attributed to the impact of a mass coral bleaching event in 2014 and Hurricane Walaka in 2018. In particular, the bleaching affected multiple sites at Kapou and one site at Manawai where coral assemblages shifted from the Montipora dilatata/flabellata/turgescens complex to M. capitata dominance; despite being the dominant species at multiple monitoring sites prior to the bleaching, the M. dilatata/flabellata/turgescens complex has not been recorded at any of our monitoring sites in recent years. Coral conditions, such as bleaching, predation, subacute tissue loss, Porites pigmentation response and trematodiasis, did not show differences in the occurrence among the three islands/atolls once the site and temporal variabilities, as well as environmental covariates for bleaching, were considered. Coral genera, however, exhibited different sensitivities to these conditions. These findings highlight the importance of continuing coral reef monitoring at the species level, covering a broad range of coral assemblage compositions and habitat types in Papahānaumokuākea. Full article

Mangrove forests are significant blue carbon pools on the Earth with strong carbon sequestration capacity and play an important role in combating climate change. To improve the capacity of regional carbon sinks, China has implemented a Special Action Plan for Mangrove Protection and Restoration (2020–2025). In this context, based on the MaxEnt model, this study analyzed the important environmental factors affecting the distribution of mangrove forests, combined with the planning objectives and carbon density parameters of different regions; assessed the habitat suitability areas of China’s mangrove forests; and predicted their future carbon stock potential. The results showed the following: (1) Elevation was the most important factor affecting the overall distribution of mangrove forests in China, and the optimal elevation of mangrove distribution was 0.52 m. (2) The most suitable areas of mangrove forests in China were mainly distributed in Hainan, Guangxi, and Guangdong, which had great potential for carbon stock. Danzhou Bay and Hongpai Harbor in Hainan, Lianzhou Bay in Guangxi, and the Huangmao Sea in Guangdong are potential areas for habitat suitability but are not yet under high levels of protection. (3) Achieving the goals of this action plan was expected to increase carbon stocks by 4.13 Tg C. Other suitable areas not included in this plan could still increase carbon stocks by 7.99 Tg C in the long term. The study could provide a scientific basis for siting mangrove restoration areas and developing efficient management policies. Full article

An increasing sea surface temperature as a result of climate change has led to a higher frequency and strengthening of hurricanes across the northeastern Caribbean in recent decades, with increasing risks of impacts to endangered corals and to the sustainability of coral reefs. Category five Hurricanes Irma and María during 2017 caused unprecedented damage to coral reef ecosystems across northeastern Puerto Rico, including mechanical destruction, localized sediment bedload (horizontal sediment transport and abrasion), and burial by hurricane-generated rubble fields. Hurricanes inflicted significant site-, depth-, and life history trait-specific impacts to endangered corals, with substantial and widespread mechanical damage to branching species, moderate mechanical damage to foliose species, and moderate to high localized damage to small-sized encrusting and massive morphotypes due to sediment bedload and burial by rubble. There was a mean 35% decline in Acropora palmata live cover, 79% in A. cervicornis, 12% in Orbicella annularis, 7% in O. faveolata, 12% in O. franksi, and 96% in Dendrogyra cylindrus. Hurricane disturbances resulted in a major regime shift favoring dominance by macroalgae, algal turf, and cyanobacteria. Recovery from coral recruitment or fragment reattachment in A. palmata was significantly higher on more distant coral reefs, but there was none for massive endangered species. Stronger hurricanes under projected climate change may represent a major threat to the conservation of endangered coral species and reef sustainability which will require enhancing coral propagation and restoration strategies, and the integration of adaptive, ecosystem-based management approaches. Recommendations are discussed to enhance redundancy, rapid restoration responses, and conservation-oriented strategies. Full article

Tourism contributes to national and local economies especially in the Mediterranean and Aegean coasts of Turkey including the study area, Fethiye-Göcek, Muğla in southwest Turkey. The study evaluates land use/land cover (LULC) changes driven by tourism development as a case considering the past (1995–2020) and future environmental impacts on the area. High-resolution remote sensing and some socio-economic data were employed to monitor the situation and causes of LULC changes using Normalised Difference Vegetation Index (NDVI) and Land Surface Temperature (LST). The results show a decrease in the size of water surface, forest and maquis lands due to tourism development together with an increase in urban fabrics and bare lands due to urbanisation and forest fires. A significant positive correlation was detected between the urbanisation rate, population size and built-up area as well as air temperature and LST. Rapid and unplanned tourism development boosted investments for infrastructure and facilities and thus increased the demands for lands. Such lands were mostly gained by filling the sea or transforming agricultural and greenhouse areas, forest and maquis-covered lands. The unplanned development of tourism and urban areas caused serious hazards to the natural and cultural areas which threaten the sustainability of tourism. Planning suggestions are proposed to decision makers like coordination works for sustainable and responsible tourism development. Full article

Artificial reefs have been suggested as alternative dive sites to mitigate human pressure on natural reefs. Despite the conceptual appeal of artificial reefs, there is a paucity of empirical evidence regarding their effectiveness in achieving this objective. Here, we report that a small artificial reef deployed adjacent to a local coral marine protected area caused a shift in the routes taken by introductory dives and nearly eliminated their visitations to the natural fringing reef within the MPA. This behavioral shift among divers persisted for more than a decade following the AR deployment. These findings underscore the efficacy of well-designed and appropriately located artificial reefs as valuable instruments in the conservation of coral reefs. Full article

The northeastern waters of Guishan Island constitute one of the crucial fishing grounds for coastal trawl fishery in Taiwan and have been exploited for many decades. To construct the marine ecosystem and to examine the interactions among trophic levels of fisheries resources in the waters of Guishan Island, historical catch, catch composition, biological information, fishing effort, environmental data such as sea surface temperature, salinity, and nutrients were analyzed using Ecopath with Ecosim. The results indicated that the longline and drift net fisheries have a very minor incidental catch of cetaceans, with a fishing mortality (F) of 0.01 year⁻¹ and an exploitation rate (E) of 0.03. The F and E were 0.308 year⁻¹ and 0.617 for small skates and rays, and were 0.261 year⁻¹ and 0.580, respectively, for small sharks. The F and E of the dolphinfish, Coryphaena hippurus, an important pelagic species, were 0.411 year⁻¹ and 0.245, respectively. Fisheries had negative impact on major commercial species except the dolphinfish and the oil fish, Lepidocybium spp., which benefited from the reduction of their predators or competitors. The keystone species of the Guishan Island marine ecosystem is phytoplankton, which has the lowest trophic level and great biomass, and is an important energy source of the ecosystem. The influences of zooplankton and anchovy rank as second and third, respectively, with regard to the keystone species in the ecosystem due to their great biomass. Regarding the biomass of less abundant species, carangids had the highest influence followed by hairtail due to their feeding habits. The results of simulations using Ecosim indicated that the hairtail, small sharks, skates and rays, mackerels, and marine eels will benefit if fishing efforts are reduced by 30%. On the other hand, the biomass of phytoplankton, zooplankton, demersal benthivores, and shrimps will decrease due to the increase in the biomass of their predators. Full article

The ocean is the largest reservoir on Earth. With the scarcity of water resources, the destruction of the benign cycle of the marine ecosystem would seriously impact people’s quality of life and health. Oyster reefs, the world’s most endangered marine ecosystems, have been recognized as a global issue due to their numerous essential ecological functions and provision of various ecosystem services. As a result, interest in oyster reef research has been steadily increasing worldwide in recent decades. The goal of this study is to assess the knowledge structure, development trends, research hotspots, and frontier predictions of the global oyster reef research field. Based on 1051 articles selected from the Web of Science Core Collection from 1981 to 2022, this paper conducted a visual analysis of oyster reef ecosystems conservation, restoration, and management. Specifically, it examined research output characteristics, research cooperation networks, highly cited papers and core journals, and keywords. Results indicate a steady rise in research interest in oyster reefs over the past 40 years, with notable acceleration after 2014. Authoritative experts and high-impact organizations were also identified. This paper outlines habitat conservation and restoration, ecosystem services, and the impacts of climate change as the primary research hotspots and frontiers. This paper provides valuable guidance for scholars and regulators concerned about oyster reef conservation to conduct research on oyster reefs. Full article

Coral nurseries and associated techniques are the most common and widespread reef restoration methods worldwide. Due to the rapid decline of coral reefs, coral nurseries need to be eco-friendlier and adapted for effective upscaling to support large restoration projects. We suggest new design and fabrication processes associated with coral gardening and transplantation with 3D printing technology to offer a beneficial solution for growing coral fragments in on-land and underwater nurseries. We describe multiple combinations of building nurseries through the integration of biomimetic substrates and novel solutions for attaching coral fragments. Our methods are supported with supplemental testing of two hybrid substrate designs and coral mounting structures, building upon previous studies in the Gulf of Eilat/Aqaba (GoE/A), Red Sea. We identified and quantified marine invertebrates colonizing the surfaces of our substrates with environmental DNA (eDNA) by targeting the mitochondrial COI gene. We evaluated our coral fragments with and without our mounting structures to obtain an indication of total protein as a proxy for tissue health. We demonstrate the ability to design hybrid nurseries with custom mounting structures using biomimetic substrates, such as large ceramic artificial reefs, or with an interlocking mesh for holding numerous fragments to maximize out-planting efforts. We propose several methods for both land and underwater nurseries catered to various restoration initiatives for cost-effective up-scaling to meet the demands of global reef restoration. Full article

Macroalgae are widely used for bioindication and assessment; however, in the case of pollutants of different origin, it is still unclear which contaminants in thalli can be regarded as indicative because too many factors influence the ability of algae to uptake them. The present study is a part of an international HAZLESS project and was conducted in the eastern Gulf of Finland (GoF). The main goal of our study was the application of metal concentrations in macroalgae as a tool for environmental quality assessment. To achieve this goal, we calculated the threshold metal concentrations in macroalgae (Cladophora glomerata) and compared our obtained values with actual concentrations. We found significant Spearman correlations in May between metals in sediments and pore water (−0.73 for Zn, −0.62 for Cd, 0.85 for Pb) and also between metals in algae and metals in pore water (1 for Cu and Cd, 0.98 for Zn and Pb). In July, Pb in algae were significantly correlated with Pb in pore water (0.88). The application of the calculated environmental quality standard (EQS_MPC) for macroalgae has shown moderate pollution by Cu and Pb in the coastal zone of the eastern GoF. This was confirmed by an assessment based on the comparisons of metal concentrations in water with Environmental Quality Standards for water (EQS_w). However, differences in the bioaccumulation factor and EQS_MPC between May and July have shown that it is necessary to compare samples taken during the same period every year for adequate results in long-term monitoring. Considering the sensitivity of accumulating processes to the surrounding environment, we believe that in the case of habitats with diverse conditions, even for the same species of algae, threshold values should be calculated and used individually for every habitat. Our results have shown that this approach can be widely used for an assessment of environmental quality via metal concentrations in opportunistic macroalgae and can be recommended for further use. Full article

Cetacean and shark depredations in a small-scale longline fishery in the southeastern Taiwan waters were estimated based on interviews of 21 fishermen and logbooks of 12 sampling vessels, including 649 operations (681,310 hooks) from October 2009 to December 2010. Cetacean depredations were more serious than shark depredations, with damage rates of 19.26% and 11.56%, respectively. The depredation rates in number and weight from cetaceans were estimated to be 2.21% and 3.23%, respectively, and were significantly higher than those from sharks, which were estimated to be 0.51% and 0.47%, respectively. The depredation indices from cetacean and shark were estimated to be 0.93 and 0.22 per 1000 hooks, respectively. The dolphinfish and yellowfin tuna were the top two species depredated by cetaceans and sharks. The annual economic loss of the small-scale longline fishery due to cetacean and shark depredations was estimated to be USD 441.9 thousand and USD 58.8 thousand, respectively, which corresponded to 4.5% and 0.6% of the total sales of the longline fishery at Hsinkang fishing port, southeastern Taiwan. The catch in number of dolphinfish and the operation depth were significant factors that affected cetacean depredations. Full article