Description of Cylindrospermum solincola sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of Cylindrospermum badium
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sampling, Isolation and Maintenance of the Isolates
2.2. Morphological Analysis
2.3. Molecular Analysis
2.4. Phylogenetic Analysis
2.5. 16S-23S ITS Secondary Structure Analysis
2.6. Calculations of 16S rRNA Gene Percent Similarity and 16S-23S ITS Percent Dissimilarity
2.7. Preparation of Holotype and Isotype
3. Results
3.1. Site Studied
3.2. Morphological Characterization
3.3. Phylogenetic Analysis Based on 16S rRNA Gene and 16S-23S ITS Region
3.4. Percent Similarity Analysis of 16S rRNA Gene
3.5. Secondary Structure Analysis of 16S-23S ITS Region
3.6. Percent Dissimilarity Analysis of 16S-23S ITS Region
3.7. Taxonomic Description
4. Discussion
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Species | Habitat | Vegetative Cell (Size; LxW) | Heterocyte (Size; LxW) | Akinete (Size; LxW) |
---|---|---|---|---|
Cylindrospermum solincola KUT1-PS | Wet soil | Cylindrical, often longer than wide, some isodiametric and shorter than wide, 1.49–3.08 × 1.72–2.11 µm | Terminal, solitary, both terminal ends, oval, rarely spherical, 2.89–4.39 × 2.61–3.33 µm | Large, solitary, at one terminal end, adjoining to heterocyte, young cylindrical, mature oblong, wall serrated with spines, yellowish in colour, 10.21–13.98 × 5.04–6.41 µm |
Cylindrospermum gorakhpurence | Moist soils in paddy fields | Cylindrical, 7–16.5 × 3.5–5 µm | Terminal, solitary, both terminal ends, ellipsoidal, 13.2–16.5 × 6–7.8 µm | Subterminal, ellipsoidal with rounded ends, wall thick, with delicate, needle-like projections, 26.4–33 × 13.2–20 µm |
Cylindrospermum dobrudjense | Agricultural soils (Medicago sativa) | Cylindrical, longer than wide, 6.6–9.2 × 4 µm | Terminal, both terminal ends, elongated ellipsoidal, conical or subspherical, 9.4–13.4 × 6.7 µm | Solitary, elongated, ellipsoidal, with rounded ends, wall with very fine and short spines, 22.8–26.6 (28.8) × 9.2–10.5 µm |
Cylindrospermum ecballiisporum | Edge of wetted, peaty, partly periodically submerged pools and ditches | Cylindrical, ± isodiametric or longer than wide, end cells (without heterocytes) cylindrical and rounded 2.5–7.5 (8) × 2–3.4 µm | Terminal, almost spherical, ellipsoidal, short cylindrical or ovoid, slightly wider than vegetative cells, 5–10 × 3.5–6 µm | Solitary, rarely in pairs, adjoining to heterocytes, cylindrical-oval, rarely ellipsoidal, wall thick, with spines, (14) 20–33 (40) × (9) 11–14.5 (16) µm |
Cylindrospermum maius CCALA 998 | Recultivated soil after coal mining | Cylindrical, longer than wide, isodiametric to shorter than wide, apical cell rounded to cylindrical, 3.7–6.5 × 3.9–5 µm | Terminal, spherical to elongated, 4–10 × 4.5–6 µm | Solitary, adjoining to heterocyte, cylindrical, oval to ellipsoidal, wall smooth, initially colourless, later brown and layered 1–1.5 µm wide, (18) 21–36 × 10–15 (16) µm |
Cylindrospermum badium 18C-PS | Vernal pool | Cylindrical, isodiametric to longer than wide, 1.44–2.92 1.47–1.88 µm | Terminal, solitary, one or both terminal ends, oval to ovoid with broad base, 2.59–3.74 × 2.04–2.51 µm | Large, solitary, at one terminal end, adjoining to heterocyte, young oval to oblong, covered with a thin, transparent and diffluent layer of mucilage, mature oblong, wall thick, smooth and chestnut brown, 6.57–10.63 × 4.31–7.19 µm |
Cylindrospermum badium CCALA 1000 | Recultivated soil after coal mining with sweet gum | Cylindrical, isodiametric to longer than wide, 3.5–7.5 × 3.0–4.8 µm | Terminal, solitary, almost spherical, elongated or slightly conical, 5–10 (13) ×, 3–5 µm | Solitary, paraheterocytic, oval broadly, flattened at ends, wall should be granulated or coarse instead of smooth, wide and chestnut-coloured, 17–30 × 10.0–14.4 µm |
Cylindrospermum musicola Var. kashmiriensis | Epiphytic on Myriophyllum in shallow pond | Barrel-shaped, longer than broad, 2.6–8.4 × 2.6–3.9 µm | Terminal and intercalary, terminal, solitary, one or both terminal ends, oval or ellipsoidal, intercalary, solitary or in pairs, shorter or longer than vegetative cells, 5.2–10.5 × 3.9–5.9 µm | Adjoining to terminal heterocyte, barrel-ellipsoidal, wall thick and smooth, 9.5–13.6 × 5.2–7.8 µm |
Cylindrospermum stagnale | Marshes, pools, ponds, lakes | Cylindrical, isodiametric or double longer than wide, (3) 3.8–4.5 (6?) µm wide, apical cylindrical-rounded | Usually oval, ovoid, or cylindrical, with rounded ends, rarely almost spherical, 7–16 × (4.5) 6–7 µm | Solitary, cylindrical or cylindrical-oval, rounded at the ends, smooth-walled, 32–40 × 10–16 µm |
Cylindrospermum skujae | Wet sandy soils or sand, sometimes among mosses, in drying pools with a sandy bottom | Cylindrical, rarely isodiametric mainly 1.5–2 (4) × longer as wide, 1.6–5 (7) × 2.2–3 µm, terminal conical or cylindrical and rounded | Terminal, at one end only, oval, ovoid to cylindrical with rounded ends, (4.8) 6–8 × 2.8–4.5 µm | Solitary or pairs or up to 3 in a row oval–cylindrical, wall smooth, (12) 14–36 × 7–11.5 µm |
Cylindrospermum muscicola | Wet soils, among mosses, shallow ditches and pools with water vegetation | More or less cylindrical, ± isodiametric or slightly longer or shorter than wide, terminal conical rounded or cylindrical and rounded, 3.6–5.4 (6) × 3–5.3 µm | Elongated, 5–7 (10.5) × (3.6) 4–5 (7) µm | Solitary, oval or ovoid, rounded at ends, wall smooth, 10–20 (21) × (8.2) 9–12 µm |
Cylindrospermum alatosporum | Soil or guts of earthworms | Cells isodiametric or longer than wide, rounded at ends, 3–7 (8) × 3.5–5.0 µm | Rounded cylindrical, elongated or almost spherical, 4–9 (11) × 3.5–7.0 µm | Solitary or in pair, oval–rhomboid, wall smooth, 20–32 × (6.5) 10.0–13.0 (17.5) µm |
Cylindrospermum licheniforme | Prairie remnant soil | Cylindrical, shorter than wide to isodiametric, 3.1–5.1 × 3.6–4.8 µm | Terminal, solitary, oval to elongated to bluntly conical, 5.4–9 × 4.0–5.2 µm | Solitary, paraheterocytic, oval broadly to elongated, wall smooth, 13–23 × 7.0–12.4 µm |
Cylindrospermum moravicum | Cave sediment | Cylindrical, rarely concave or irregular, isodiametric, longer than wide, 2.7–5 × 3.5–7 µm | Terminal, solitary, spherical to cylindrical elongated, 5.0–9.0 (11) × 2.7–6.0 µm | Solitary, paraheterocytic, granulated, cylindrical, with widened end toward the heterocyte, wall wide with colourless to golden-brown, smooth, internally structured or lamellate exospores, (18) 22–32 × 9–13 µm |
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Kumar, N.; Saraf, A.; Pal, S.; Singh, P. Description of Cylindrospermum solincola sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of Cylindrospermum badium. Diversity 2023, 15, 592. https://doi.org/10.3390/d15050592
Kumar N, Saraf A, Pal S, Singh P. Description of Cylindrospermum solincola sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of Cylindrospermum badium. Diversity. 2023; 15(5):592. https://doi.org/10.3390/d15050592
Chicago/Turabian StyleKumar, Naresh, Aniket Saraf, Sagarika Pal, and Prashant Singh. 2023. "Description of Cylindrospermum solincola sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of Cylindrospermum badium" Diversity 15, no. 5: 592. https://doi.org/10.3390/d15050592
APA StyleKumar, N., Saraf, A., Pal, S., & Singh, P. (2023). Description of Cylindrospermum solincola sp. nov. from Jammu and Kashmir, India and Further Insights into the Ecological Distribution and Morphological Attributes of Cylindrospermum badium. Diversity, 15(5), 592. https://doi.org/10.3390/d15050592