Bacterial and Fungal Surfaces: From Biophysics to Immunology

A special issue of Microorganisms (ISSN 2076-2607). This special issue belongs to the section "Molecular Microbiology and Immunology".

Deadline for manuscript submissions: closed (15 March 2022) | Viewed by 10159

Special Issue Editors


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Guest Editor
Louvain Institute of Biomolecular Science and Technology, Université Catholique de Louvain, Croix du Sud, 4-5, bte L7.07.07, B-1348 Louvain-la-Neuve, Belgium.
Interests: bacteria; cell envelope; surface ultrastructure

E-Mail Website
Guest Editor
Louvain Institute of Biomolecular Science and Technology, Université Catholique de Louvain, Croix du Sud, 4-5, bte L7.07.07, B-1348 Louvain-la-Neuve, Belgium
Interests: bacteria; nanomechanics; host-bacteria interactions; single-molecule approaches

Special Issue Information

Dear Colleagues,

The exposed surface of the microbial cell forms its interface with the incredibly diverse environments that microbes inhabit. The way this interface is chemically and morphologically organized, mechanically stabilized, and dynamically rearranged along the bacterial and fungal lifecycle determines the ability of these microorganisms to interact with their surroundings. From a biophysical perspective, surface adhesive properties—determined by specific chemical groups or dedicated adhesins and surface appendages such as pili or flagella—play crucial roles in environmental sensing, colonization, biofilm formation, and infection. Thus, deciphering the molecular forces underlying bacterial and fungal interactions with biotic (e.g., mammalian cells, proteins) or abiotic surfaces (e.g., medical devices) holds promise in the design of novel antiadhesive therapies. From an immunological perspective, surface-exposed virulence factors and antigens—including proteins, lipids, and glycans—are not only critical to pathogen–host cell interactions, but also for immune modulation. Understanding how the complex biochemistry of bacterial and fungal surfaces interacts with the host immune system may in turn improve diagnostic tools and therapies. Finally, antimicrobials and other environmental challenges affecting the mechanical or chemical properties of the microbial cell envelope often have functional consequences at the surface. How the microbial surface is altered by antimicrobials will aid in a better understanding of antimicrobial modes of action.
Given these premises, we look forward to receiving your contributions to this Special Issue, in the form of original research or review papers that will shed light on different aspects of bacterial and fungal surfaces, from model systems to living cells: their biophysics, their biochemistry, and their industrial and medical importance (e.g., in biofilm formation and in pathogen–host interactions).

Dr. Albertus Viljoen
Dr. Marion Mathelié-Guinlet
Guest Editors

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Keywords

  • bacteria
  • fungi
  • cell envelope
  • mechanics
  • surface ultrastructure
  • surface chemistry
  • host-pathogen interactions

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Published Papers (3 papers)

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Research

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23 pages, 7166 KiB  
Article
A Multi-Skilled Mathematical Model of Bacterial Attachment in Initiation of Biofilms
by Kanchana Chathoth, Louis Fostier, Bénédicte Martin, Christine Baysse and Fabrice Mahé
Microorganisms 2022, 10(4), 686; https://doi.org/10.3390/microorganisms10040686 - 23 Mar 2022
Cited by 4 | Viewed by 2170
Abstract
The initial step of biofilm formation is bacteria attachment to biotic or abiotic surfaces and other bacteria through intra or interspecies interactions. Adhesion can be influenced by physicochemical conditions of the environment, such as iron. There is no available mathematical model of bacterial [...] Read more.
The initial step of biofilm formation is bacteria attachment to biotic or abiotic surfaces and other bacteria through intra or interspecies interactions. Adhesion can be influenced by physicochemical conditions of the environment, such as iron. There is no available mathematical model of bacterial attachment giving realistic initiation rather than random adhesion. We describe a simple stochastic attachment model, from the simplest case in two dimensions with one bacterial species attaching on a homogeneous flat surface to more complex situations, with either several bacterial species, inhomogeneous or non-flat surfaces, or in three dimensions. The model depends on attachment probabilities (on the surface, laterally, or vertically on bacteria). Effects of each of these parameters were analyzed. This mathematical model is then applied to experimental oral microcolonies of Porphyromonas gingivalis, Streptococcus gordonii, and Treponema denticola, either as mono-, two, or three species, under different iron concentrations. The model allows to characterize the adhesion of three bacterial species and explore the effect of iron on attachment. This model appears as a powerful tool for initial attachment analysis of bacterial species. It will enable further modeling of biofilm formation in later steps with biofilm initialization more relevant to real-life subgingival biofilms. Full article
(This article belongs to the Special Issue Bacterial and Fungal Surfaces: From Biophysics to Immunology)
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Review

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20 pages, 3966 KiB  
Review
Squalamine and Its Aminosterol Derivatives: Overview of Biological Effects and Mechanisms of Action of Compounds with Multiple Therapeutic Applications
by Nour Mammari, Elsa Salles, Audrey Beaussart, Sofiane El-Kirat-Chatel and Mihayl Varbanov
Microorganisms 2022, 10(6), 1205; https://doi.org/10.3390/microorganisms10061205 - 13 Jun 2022
Cited by 6 | Viewed by 2753
Abstract
Squalamine is a natural aminosterol that has been discovered in the tissues of the dogfish shark (Squalus acanthias). Studies have previously demonstrated that this promoter compound and its derivatives exhibit potent bactericidal activity against Gram-negative, Gram-positive bacteria, and multidrug-resistant bacteria. The [...] Read more.
Squalamine is a natural aminosterol that has been discovered in the tissues of the dogfish shark (Squalus acanthias). Studies have previously demonstrated that this promoter compound and its derivatives exhibit potent bactericidal activity against Gram-negative, Gram-positive bacteria, and multidrug-resistant bacteria. The antibacterial activity of squalamine was found to correlate with that of other antibiotics, such as colistin and polymyxins. Still, in the field of microbiology, evidence has shown that squalamine and its derivatives have antifungal activity, antiprotozoa effect against a limited list of protozoa, and could exhibit antiviral activity against both RNA- and DNA-enveloped viruses. Furthermore, squalamine and its derivatives have been identified as being antiangiogenic compounds in the case of several types of cancers and induce a potential positive effect in the case of other diseases such as experimental retinopathy and Parkinson’s disease. Given the diverse effects of the squalamine and its derivatives, in this review we provide the different advances in our understanding of the various effects of these promising molecules and try to draw up a non-exhaustive list of the different mechanisms of actions of squalamine and its derivatives on the human organism and on different pathogens. Full article
(This article belongs to the Special Issue Bacterial and Fungal Surfaces: From Biophysics to Immunology)
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21 pages, 21419 KiB  
Review
Mycobacterial Adhesion: From Hydrophobic to Receptor-Ligand Interactions
by Albertus Viljoen, Yves F. Dufrêne and Jérôme Nigou
Microorganisms 2022, 10(2), 454; https://doi.org/10.3390/microorganisms10020454 - 16 Feb 2022
Cited by 7 | Viewed by 4180
Abstract
Adhesion is crucial for the infective lifestyles of bacterial pathogens. Adhesion to non-living surfaces, other microbial cells, and components of the biofilm extracellular matrix are crucial for biofilm formation and integrity, plus adherence to host factors constitutes a first step leading to an [...] Read more.
Adhesion is crucial for the infective lifestyles of bacterial pathogens. Adhesion to non-living surfaces, other microbial cells, and components of the biofilm extracellular matrix are crucial for biofilm formation and integrity, plus adherence to host factors constitutes a first step leading to an infection. Adhesion is, therefore, at the core of pathogens’ ability to contaminate, transmit, establish residency within a host, and cause an infection. Several mycobacterial species cause diseases in humans and animals with diverse clinical manifestations. Mycobacterium tuberculosis, which enters through the respiratory tract, first adheres to alveolar macrophages and epithelial cells leading up to transmigration across the alveolar epithelium and containment within granulomas. Later, when dissemination occurs, the bacilli need to adhere to extracellular matrix components to infect extrapulmonary sites. Mycobacteria causing zoonotic infections and emerging nontuberculous mycobacterial pathogens follow divergent routes of infection that probably require adapted adhesion mechanisms. New evidence also points to the occurrence of mycobacterial biofilms during infection, emphasizing a need to better understand the adhesive factors required for their formation. Herein, we review the literature on tuberculous and nontuberculous mycobacterial adhesion to living and non-living surfaces, to themselves, to host cells, and to components of the extracellular matrix. Full article
(This article belongs to the Special Issue Bacterial and Fungal Surfaces: From Biophysics to Immunology)
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